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Intron Name: Anas_platyrhynchos_platyrhynchos_4_24340653_24353895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24340653 - 24353895

Intron Length:

13243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGGCAT

5'SS Class:

major

3'SS Sequence:

GCTCTTTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

AGCTTGTTGATG

Flanking Amino Acid:

SSPMKEQLDEEGDPQPSVKE

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

72.4

38.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

0.63

0.8

73.2

31.7

Minor 5ss

34.1

-1.8

3.5

47.7

42.3

Minor BPS

45.4

-0.5

2.1

48.16

Associated Gene:

Gene:

FAM53A

Ensembl Gene ID:

ENSAPLG00000015975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022723

24340502 - 24401029

60528