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Intron Name: Anas_platyrhynchos_platyrhynchos_4_24393505_24400784_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24393505 - 24400784

Intron Length:

7280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

TGATTGATTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTTCTGATTG

Flanking Amino Acid:

LTCKTYNINLYSSEKLNKSG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

75.2

40.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

74.5

0.55

70.5

44.2

Minor 5ss

-1.6

3.3

45.6

43.8

Minor BPS

57.1

0.08

1.8

67.65

40.5

Associated Gene:

Gene:

FAM53A

Ensembl Gene ID:

ENSAPLG00000015975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022723

24340502 - 24401029

60528

ENSAPLT00000016666

24353728 - 24401029

47302