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Intron Name: Anas_platyrhynchos_platyrhynchos_4_24467805_24468052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24467805 - 24468052

Intron Length:

248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTCCGCCGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

ATGGAAATAACG

Flanking Amino Acid:

QRSPHGAETASPQSAPRWCQ

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.2

36.8

Major BPS

61.3

0.28

30.6

Major PPT

63.8

0.31

58.4

38.4

Minor 5ss

30.3

-2.3

3.5

Minor BPS

42.3

-0.7

2.1

49.14

43.9

Associated Gene:

Gene:

SLBP

Ensembl Gene ID:

ENSAPLG00000015989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048275

24460489 - 24468417

7929

ENSAPLT00000031281

24460489 - 24468417

7929

ENSAPLT00000016692

24451044 - 24468417

17374