Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_24495942_24496328_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24495942 - 24496328

Intron Length:

387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGACAC

5'SS Class:

major

3'SS Sequence:

CTCTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

GTGTACTTAACT

Flanking Amino Acid:

TLLAHSLLPLGYYLGMCFAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

62.5

38.1

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

85.8

0.81

0.7

80.4

24.9

Minor 5ss

27.3

-2.6

34.5

41.3

Minor BPS

75.4

0.88

1.5

86.11

39.5

Associated Gene:

Gene:

TMEM129

Ensembl Gene ID:

ENSAPLG00000016182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016887

24490253 - 24496533

6281