Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_24506259_24507428_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24506259 - 24507428

Intron Length:

1170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TCTTCCCACCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

GGGATTTTGACT

Flanking Amino Acid:

EILEKKEPRSPEISKQNVVE

Intron Amino Acid Position:

457

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.3

74.5

37.6

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

62.6

0.28

60.9

34.5

Minor 5ss

36.9

-1.5

2.7

46.9

41.8

Minor BPS

54.3

0.22

1.3

64.48

40.1

Associated Gene:

Gene:

TACC3

Ensembl Gene ID:

ENSAPLG00000016198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023462

24502335 - 24541857

39523

ENSAPLT00000020289

24501697 - 24518138

16442

ENSAPLT00000016936

24502335 - 24550803

48469