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Intron Name: Anas_platyrhynchos_platyrhynchos_4_24571918_24572138_R

Intron Information:

Intron Rank:

149781

Intron Class:

major

Intron Phase:

Intron Coordinates:

24571918 - 24572138

Intron Length:

221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAA

U12 Branch Point Sequence:

GATTGATTAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

87.9

29.3

Major BPS

64.8

0.37

1.2

67.9

36.3

Major PPT

85.9

0.81

0.8

83.8

31.2

Minor 5ss

45.7

-0.5

2.8

45.5

Minor BPS

48.9

-0.1

2.1

63.35

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043890

24570756 - 24572790

2035