Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_24976345_24980874_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24976345 - 24980874

Intron Length:

4530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

TTCTGCTTCATT

Flanking Amino Acid:

VLGNFTVRVTDSPSSGDDED

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

76.8

31.8

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

79.5

0.66

0.7

72.9

31.9

Minor 5ss

39.1

-1.2

50.2

46.2

Minor BPS

56.4

0.28

2.2

79.08

43.9

Associated Gene:

Gene:

FGFR3

Ensembl Gene ID:

ENSAPLG00000016333

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018436

24956830 - 25009824

52995

ENSAPLT00000017079

24956830 - 25009824

52995