Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_24980929_24986706_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24980929 - 24986706

Intron Length:

5778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAG

U12 Branch Point Sequence:

GCCTGTTCAGCT

Flanking Amino Acid:

EDDDDESEDTGVPFWTRPDK

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

80.7

34.7

Major BPS

60.8

0.27

1.6

71.4

45.1

Major PPT

91.4

0.93

0.6

91.5

19.8

Minor 5ss

-0.9

2.9

59.3

45.1

Minor BPS

42.7

-0.4

2.1

56.22

46.3

Associated Gene:

Gene:

FGFR3

Ensembl Gene ID:

ENSAPLG00000016333

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018436

24956830 - 25009824

52995

ENSAPLT00000017079

24956830 - 25009824

52995