Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_25000034_25000848_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25000034 - 25000848

Intron Length:

815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGAA

5'SS Class:

major

3'SS Sequence:

TCTACCCAAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TTGGCAATAACA

Flanking Amino Acid:

KVSKFPLKRQVSLESNSSMN

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

71.3

34.5

Major BPS

78.6

0.71

79.6

32.9

Major PPT

64.8

0.33

59.9

35.6

Minor 5ss

35.3

-1.7

3.4

46.9

48.4

Minor BPS

0.06

69.57

42.4

Associated Gene:

Gene:

FGFR3

Ensembl Gene ID:

ENSAPLG00000016333

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018436

24956830 - 25009824

52995

ENSAPLT00000017079

24956830 - 25009824

52995