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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25088714_25089299_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25088714 - 25089299

Intron Length:

586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGTGG

5'SS Class:

major

3'SS Sequence:

CCATTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

TTTCTTGTGACC

Flanking Amino Acid:

LKGDIQEYNEDLQEIKELSK

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

63.7

43.1

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

82.9

0.74

0.8

80.5

31.3

Minor 5ss

35.5

-1.6

3.3

46.8

48.5

Minor BPS

50.9

0.01

70.2

35.5

Associated Gene:

Gene:

LETM1

Ensembl Gene ID:

ENSAPLG00000003508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027735

25085901 - 25107504

21604

ENSAPLT00000022428

25084441 - 25108373

23933

ENSAPLT00000045986

25084441 - 25109856

25416

ENSAPLT00000003592

25085360 - 25107504

22145

ENSAPLT00000033297

25084441 - 25119856

35416

ENSAPLT00000031446

25084296 - 25107504

23209