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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25089435_25092328_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25089435 - 25092328

Intron Length:

2894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCTGG

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

TTTTCTTTTACA

Flanking Amino Acid:

DTAPVLEGIKGEEITKEEID

Intron Amino Acid Position:

531

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

62.5

44.6

Major BPS

71.4

0.53

67.3

39.3

Major PPT

95.6

1.03

0.5

91.4

20.1

Minor 5ss

43.3

-0.7

2.9

56.5

47.6

Minor BPS

77.6

0.86

1.5

87.29

30.4

Associated Gene:

Gene:

LETM1

Ensembl Gene ID:

ENSAPLG00000003508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031446

25084296 - 25107504

23209

ENSAPLT00000027735

25085901 - 25107504

21604

ENSAPLT00000022428

25084441 - 25108373

23933

ENSAPLT00000045986

25084441 - 25109856

25416

ENSAPLT00000003592

25085360 - 25107504

22145

ENSAPLT00000033297

25084441 - 25119856

35416