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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25096061_25096553_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25096061 - 25096553

Intron Length:

493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

ACGTTCTGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TTTATTTTACGT

Flanking Amino Acid:

RLRSIKADDKLIAEEGVDTL

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

76.8

33.7

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

71.2

0.48

65.5

40.4

Minor 5ss

32.2

-2

41.4

39.1

Minor BPS

52.1

0.14

1.9

75.45

41.9

Associated Gene:

Gene:

LETM1

Ensembl Gene ID:

ENSAPLG00000003508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027735

25085901 - 25107504

21604

ENSAPLT00000022428

25084441 - 25108373

23933

ENSAPLT00000045986

25084441 - 25109856

25416

ENSAPLT00000003592

25085360 - 25107504

22145

ENSAPLT00000033297

25084441 - 25119856

35416

ENSAPLT00000031446

25084296 - 25107504

23209