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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25213286_25214850_F


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
25213286 - 25214850

Intron Length:
1565

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAGAGTAT

5'SS Class:
major

3'SS Sequence:
GTTTGATCTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTGAT

U12 Branch Point Sequence:
AAAGCATTCACT

Flanking Amino Acid:
THFYMLTIDKDRIIDAGPKG

Intron Amino Acid Position:
1095

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.4
0.53
1.1
69
38.3

Major BPS
78.6
0.71
1.2
71.4
45.1

Major PPT
76.8
0.6
0.9
66.8
44.1

Minor 5ss
36.4
-1.5
3.7
54.5
49.7

Minor BPS
47.4
-0.1
2.1
65.87
44.1

Associated Gene:

Gene:
NSD2

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25135563 - 25218321
82759

25143984 - 25218261
74278

25155210 - 25218261
63052

25155210 - 25218261
63052