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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25233779_25237630_R

Intron Information:

Intron Rank:

141233

Intron Class:

major

Intron Phase:

Intron Coordinates:

25233779 - 25237630

Intron Length:

3852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

GTAATCTGACCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.1

39.1

Major BPS

76.8

0.67

40.9

Major PPT

77.3

0.62

0.8

76.3

32.2

Minor 5ss

27.9

-2.5

3.2

39.3

46.1

Minor BPS

47.8

-0.1

1.7

58.57

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023331

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017507

25230971 - 25237685

6715