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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25297646_25302166_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25297646 - 25302166

Intron Length:

4521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTCTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTGTTTTTGATG

Flanking Amino Acid:

KKTAYNLDTRTETLLLQVEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

74.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

77.8

0.63

0.7

Minor 5ss

31.1

-2.2

3.1

31.2

42.7

Minor BPS

63.1

0.27

1.3

64.84

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045951

25273766 - 25305167

31402

ENSAPLT00000023025

25290540 - 25305167

14628