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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25366321_25368821_F

Intron Information:

Intron Rank:

137423

Intron Class:

major

Intron Phase:

Intron Coordinates:

25366321 - 25368821

Intron Length:

2501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

TCTGTGTTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

82.1

0.72

0.9

75.5

38.3

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

46.1

-0.3

2.4

62.01

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040399

25365847 - 25368928

3082