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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25412376_25413577_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25412376 - 25413577

Intron Length:

1202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTATCTCCATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TCTTCCTTATCT

Flanking Amino Acid:

LTQLLYGLLAVICFVVTKSF

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

78.8

0.72

67.9

40.1

Major PPT

74.3

0.55

0.8

69.1

31.4

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

79.3

1.5

91.83

37.8

Associated Gene:

Gene:

NAT8L

Ensembl Gene ID:

ENSAPLG00000004458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040964

25411763 - 25435040

23278

ENSAPLT00000025570

25411763 - 25435264

23502

ENSAPLT00000004573

25411763 - 25435137

23375