Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_25413743_25434769_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25413743 - 25434769

Intron Length:

21027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCCG

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTACAT

U12 Branch Point Sequence:

GCGGCTACATGT

Flanking Amino Acid:

DIEQYYMKPPGSCFWVAVLD

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

71.4

40.3

Major BPS

52.4

0.06

1.3

62.9

43.3

Major PPT

78.7

0.65

0.8

73.8

31.3

Minor 5ss

29.1

-2.4

2.7

41.9

Minor BPS

33.1

-1.2

1.9

40.92

41.7

Associated Gene:

Gene:

NAT8L

Ensembl Gene ID:

ENSAPLG00000004458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025570

25411763 - 25435264

23502

ENSAPLT00000004573

25411763 - 25435137

23375