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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25478156_25481406_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25478156 - 25481406

Intron Length:

3251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTCATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTACATTAAAA

Flanking Amino Acid:

ERQAVNFVVQGSAADLCKMA

Intron Amino Acid Position:

608

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

80.2

0.68

0.8

75.8

32.8

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

0.5

1.7

79.31

35.9

Associated Gene:

Gene:

POLN

Ensembl Gene ID:

ENSAPLG00000004531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030513

25456621 - 25550628

94008

ENSAPLT00000004654

25456621 - 25559172

102552