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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25484654_25487220_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25484654 - 25487220

Intron Length:

2567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

TTCTATGCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TTTCTATGCACC

Flanking Amino Acid:

RVVYSVVYGAGKERLAECLG

Intron Amino Acid Position:

527

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

85.3

32.2

Major BPS

73.8

0.59

1.3

72.8

Major PPT

0.45

62.9

42.8

Minor 5ss

43.9

-0.7

2.9

60.2

44.5

Minor BPS

46.1

-0.3

2.1

65.76

39.3

Associated Gene:

Gene:

POLN

Ensembl Gene ID:

ENSAPLG00000004531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004654

25456621 - 25559172

102552

ENSAPLT00000030513

25456621 - 25550628

94008