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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25526399_25527180_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25526399 - 25527180

Intron Length:

782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTAATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTCTAATA

Flanking Amino Acid:

LPKIMLEYRQVRKIKSTYVD

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

71.8

36.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.45

66.8

Minor 5ss

30.7

-2.2

3.2

46.8

Minor BPS

62.1

0.38

1.6

73.69

31.8

Associated Gene:

Gene:

POLN

Ensembl Gene ID:

ENSAPLG00000004531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030513

25456621 - 25550628

94008

ENSAPLT00000004654

25456621 - 25559172

102552