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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25529951_25530369_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25529951 - 25530369

Intron Length:

419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTAATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

GTTTTCTTACAT

Flanking Amino Acid:

LLTSSSQLREVLFEKLKLHT

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

83.5

28.8

Major BPS

84.4

0.85

34.5

Major PPT

75.4

0.57

0.9

71.5

38.5

Minor 5ss

43.9

-0.7

3.1

65.3

45.8

Minor BPS

64.2

0.52

1.7

81.62

39.7

Associated Gene:

Gene:

POLN

Ensembl Gene ID:

ENSAPLG00000004531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030513

25456621 - 25550628

94008

ENSAPLT00000004654

25456621 - 25559172

102552