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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25531260_25531518_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25531260 - 25531518

Intron Length:

259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TACTCTGTATTT

Flanking Amino Acid:

LELPLIKILAVMETHKIHVN

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.8

31.7

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

85.9

0.81

0.9

79.9

37.7

Minor 5ss

39.9

-1.1

2.8

51.4

45.5

Minor BPS

47.7

-0

2.2

68.17

43.6

Associated Gene:

Gene:

POLN

Ensembl Gene ID:

ENSAPLG00000004531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030513

25456621 - 25550628

94008

ENSAPLT00000004654

25456621 - 25559172

102552