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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25533160_25537936_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25533160 - 25537936

Intron Length:

4777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTATCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTATCA

Flanking Amino Acid:

TDTGTLRNASYQNLGVNLEK

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

82.1

37.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

91.8

0.94

0.7

93.4

22.6

Minor 5ss

37.9

-1.4

2.8

52.3

44.3

Minor BPS

71.9

0.68

1.5

82.41

32.7

Associated Gene:

Gene:

POLN

Ensembl Gene ID:

ENSAPLG00000004531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030513

25456621 - 25550628

94008

ENSAPLT00000004654

25456621 - 25559172

102552