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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25538095_25538598_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25538095 - 25538598

Intron Length:

504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTTATTTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

AATAACTTATTT

Flanking Amino Acid:

IYGNEISWKQVADSVVLDPR

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

1.1

79.6

34.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

84.7

0.78

0.7

80.7

31.2

Minor 5ss

42.8

-0.8

3.2

61.1

43.8

Minor BPS

51.4

0.12

1.8

69.76

40.8

Associated Gene:

Gene:

POLN

Ensembl Gene ID:

ENSAPLG00000004531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030513

25456621 - 25550628

94008

ENSAPLT00000004654

25456621 - 25559172

102552