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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25538712_25541050_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25538712 - 25541050

Intron Length:

2339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGTTAATAAATT

Flanking Amino Acid:

QEEQAHKKFAWRVLFQMLRR

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

0.9

72.2

32.1

Major BPS

84.4

0.85

34.5

Major PPT

84.1

0.77

0.8

80.6

31.5

Minor 5ss

28.5

-2.5

2.7

29.8

36.4

Minor BPS

49.8

0.06

2.1

75.07

41.5

Associated Gene:

Gene:

POLN

Ensembl Gene ID:

ENSAPLG00000004531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030513

25456621 - 25550628

94008

ENSAPLT00000004654

25456621 - 25559172

102552