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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25541242_25541687_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25541242 - 25541687

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTATACTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTATACTTAACA

Flanking Amino Acid:

DGSSQLNSEQALTSSVKGIV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

1.1

78.8

30.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

0.56

70.2

39.6

Minor 5ss

28.4

-2.5

2.9

32.1

42.4

Minor BPS

79.6

0.93

1.4

85.8

32.6

Associated Gene:

Gene:

POLN

Ensembl Gene ID:

ENSAPLG00000004531

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030513

25456621 - 25550628

94008

ENSAPLT00000004654

25456621 - 25559172

102552