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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25809657_25819580_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25809657 - 25819580

Intron Length:

9924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATATTCA

5'SS Class:

major

3'SS Sequence:

TGTATCTCTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TAATTATTAATT

Flanking Amino Acid:

FLNESAEMLQTLNVTEEKFV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

72.7

32.4

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

75.9

0.58

0.9

69.8

36.6

Minor 5ss

45.9

-0.4

2.5

59.3

45.3

Minor BPS

0.58

1.5

79.1

36.6

Associated Gene:

Gene:

CFAP99

Ensembl Gene ID:

ENSAPLG00000005144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045695

25807351 - 25863290

55940

ENSAPLT00000045482

25809529 - 25863290

53762