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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25819726_25822625_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25819726 - 25822625

Intron Length:

2900

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TATCTTTTGATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGCATTTTAAAT

Flanking Amino Acid:

CLISERNLYIVICYLATFQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.56

72.7

37.3

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

58.1

0.33

1.4

70.08

40.8

Associated Gene:

Gene:

CFAP99

Ensembl Gene ID:

ENSAPLG00000005144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045695

25807351 - 25863290

55940

ENSAPLT00000045482

25809529 - 25863290

53762

ENSAPLT00000005309

25807356 - 25863290

55935