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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25838733_25839659_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25838733 - 25839659

Intron Length:

927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGCTTT

5'SS Class:

weak_major

3'SS Sequence:

GTTTGAACTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAA

U12 Branch Point Sequence:

TTGGTTTGAACT

Flanking Amino Acid:

CATTNPKKGENIHNDMKSRP

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

80.5

Major BPS

69.4

0.48

1.2

63.4

44.3

Major PPT

71.9

0.49

63.9

41.8

Minor 5ss

70.5

0.69

2.2

81.8

38.5

Minor BPS

59.8

0.39

1.5

75.75

41.5

Associated Gene:

Gene:

CFAP99

Ensembl Gene ID:

ENSAPLG00000005144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045695

25807351 - 25863290

55940

ENSAPLT00000045482

25809529 - 25863290

53762

ENSAPLT00000005309

25807356 - 25863290

55935