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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25846072_25847293_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25846072 - 25847293

Intron Length:

1222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATTTATA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAATAT

U12 Branch Point Sequence:

AATCAGCTAACA

Flanking Amino Acid:

LKLQKYKQQIVQEVSEENRE

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

81.6

31.3

Major BPS

50.9

0.02

1.1

47.4

35.7

Major PPT

93.5

0.98

0.6

92.3

18.1

Minor 5ss

45.5

-0.5

2.5

60.1

44.4

Minor BPS

43.2

-0.5

2.4

58.84

39.8

Associated Gene:

Gene:

CFAP99

Ensembl Gene ID:

ENSAPLG00000005144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045695

25807351 - 25863290

55940

ENSAPLT00000045482

25809529 - 25863290

53762

ENSAPLT00000005309

25807356 - 25863290

55935