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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25860694_25861465_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25860694 - 25861465

Intron Length:

772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGGGAG

5'SS Class:

major

3'SS Sequence:

TGCAATCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAA

U12 Branch Point Sequence:

TAGTCTAAAAAC

Flanking Amino Acid:

PQKTSIASRKSISGCCPQKS

Intron Amino Acid Position:

588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.3

56.6

42.5

Major BPS

67.6

0.44

1.2

69.9

35.3

Major PPT

0.54

0.9

69.5

41.2

Minor 5ss

30.1

-2.3

3.4

37.3

47.4

Minor BPS

45.9

-0.3

57.57

Associated Gene:

Gene:

CFAP99

Ensembl Gene ID:

ENSAPLG00000005144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045482

25809529 - 25863290

53762

ENSAPLT00000005309

25807356 - 25863290

55935