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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25872116_25873011_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25872116 - 25873011

Intron Length:

896

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTTTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TGGATTCTAACG

Flanking Amino Acid:

EAEPIELEESAGEEVVDLTC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

80.5

34.9

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

75.1

0.56

1.1

79.2

38.4

Minor 5ss

49.9

-0

2.8

70.4

41.2

Minor BPS

47.9

-0.3

1.7

52.99

41.9

Associated Gene:

Gene:

RNF4

Ensembl Gene ID:

ENSAPLG00000005244

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005422

25871468 - 25880132

8665