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Intron Name: Anas_platyrhynchos_platyrhynchos_4_2588644_2588887_F

Intron Information:

Intron Rank:

141861

Intron Class:

major

Intron Phase:

Intron Coordinates:

2588644 - 2588887

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCCTTTATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

1.1

84.4

27.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.7

0.87

0.6

84.5

23.4

Minor 5ss

31.4

-2.1

2.4

41.4

Minor BPS

78.8

0.9

1.5

87.38

30.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026363

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047889

2588499 - 2598196

9698