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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25950345_25955270_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25950345 - 25955270

Intron Length:

4926

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGACT

5'SS Class:

major

3'SS Sequence:

TTTGAACTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAA

U12 Branch Point Sequence:

TCTTCTGTAACA

Flanking Amino Acid:

NSLPTLVSQLRVGTTHDSCS

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

69.4

41.1

Major BPS

69.4

0.48

1.2

63.4

44.3

Major PPT

77.2

0.61

0.9

43.8

Minor 5ss

32.9

-2

3.5

Minor BPS

0.5

78.6

38.6

Associated Gene:

Gene:

FAM193A

Ensembl Gene ID:

ENSAPLG00000005276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026586

25940919 - 25983868

42950

ENSAPLT00000025172

25940919 - 25978617

37699

ENSAPLT00000005489

25937960 - 25983868

45909