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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25970361_25971645_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25970361 - 25971645

Intron Length:

1285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGAATTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TGATTCTTAATT

Flanking Amino Acid:

PATFLPDTIPGSDILTPALS

Intron Amino Acid Position:

680

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

77.3

33.4

Major BPS

0.92

0.9

86.2

29.1

Major PPT

63.4

0.3

1.2

61.9

42.7

Minor 5ss

37.4

-1.4

3.5

52.2

Minor BPS

78.4

0.97

1.1

85.31

34.7

Associated Gene:

Gene:

FAM193A

Ensembl Gene ID:

ENSAPLG00000005276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005489

25937960 - 25983868

45909

ENSAPLT00000026586

25940919 - 25983868

42950

ENSAPLT00000025172

25940919 - 25978617

37699