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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25975845_25977476_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25975845 - 25977476

Intron Length:

1632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATAAT

U12 Branch Point Sequence:

CTTCCAATAATC

Flanking Amino Acid:

AKRARHKQRKLEEKARLEAE

Intron Amino Acid Position:

1005

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

27.2

Major BPS

67.7

0.44

1.1

67.9

34.4

Major PPT

85.1

0.79

0.7

81.1

30.9

Minor 5ss

40.6

-1.1

3.1

57.4

46.8

Minor BPS

50.2

-0

1.9

66.2

39.2

Associated Gene:

Gene:

FAM193A

Ensembl Gene ID:

ENSAPLG00000005276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026586

25940919 - 25983868

42950

ENSAPLT00000025172

25940919 - 25978617

37699

ENSAPLT00000005489

25937960 - 25983868

45909