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Intron Name: Anas_platyrhynchos_platyrhynchos_4_25978324_25981266_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25978324 - 25981266

Intron Length:

2943

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTGTA

5'SS Class:

major

3'SS Sequence:

TTTCCCTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

TGGAACCTAACT

Flanking Amino Acid:

KKGDKVNNSIDDVFLPKDID

Intron Amino Acid Position:

1287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

74.2

36.5

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

85.3

0.79

0.6

81.2

23.8

Minor 5ss

-1.7

3.5

45.3

45.2

Minor BPS

51.1

0.11

1.9

71.86

44.1

Associated Gene:

Gene:

FAM193A

Ensembl Gene ID:

ENSAPLG00000005276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005489

25937960 - 25983868

45909

ENSAPLT00000026586

25940919 - 25983868

42950