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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26025389_26025871_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26025389 - 26025871

Intron Length:

483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

TTTTTTCTATTT

Flanking Amino Acid:

CLQHQLARRQDSRDTSTHFR

Intron Amino Acid Position:

416

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

0.79

0.8

83.7

25.7

Major PPT

87.7

0.85

0.6

81.3

30.7

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

54.8

0.23

1.9

79.65

37.1

Associated Gene:

Gene:

TNIP2

Ensembl Gene ID:

ENSAPLG00000005556

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005761

26025107 - 26032040

6934