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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26079530_26095163_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

26079530 - 26095163

Intron Length:

15634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTTATTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTATGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

31.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.3

0.75

0.8

77.6

36.5

Minor 5ss

31.7

-2.1

3.3

42.5

44.5

Minor BPS

62.4

0.47

1.6

81.65

33.3

Associated Gene:

Gene:

SH3BP2

Ensembl Gene ID:

ENSAPLG00000005759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027522

26079114 - 26114662

35549