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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26110561_26111148_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26110561 - 26111148

Intron Length:

588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCAAAAT

U12 Branch Point Sequence:

ATTTTCTGGATG

Flanking Amino Acid:

QPDTSDIVKDDIMVLPPAYP

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

0.2

1.2

63.9

38.5

Major PPT

87.3

0.84

0.8

84.2

30.7

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

58.4

0.12

1.5

64.78

37.2

Associated Gene:

Gene:

SH3BP2

Ensembl Gene ID:

ENSAPLG00000005759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027522

26079114 - 26114662

35549

ENSAPLT00000006006

26098201 - 26114662

16462