Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_26113289_26113723_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26113289 - 26113723

Intron Length:

435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGATGTG

5'SS Class:

major

3'SS Sequence:

GTATTATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATTAT

U12 Branch Point Sequence:

ACATACGTAATT

Flanking Amino Acid:

LNTSESFEVERTFKATSPRG

Intron Amino Acid Position:

481

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

69.5

41.5

Major BPS

0.42

1.3

60.1

46.3

Major PPT

76.9

0.61

0.9

74.5

40.1

Minor 5ss

34.3

-1.8

3.6

48.2

47.9

Minor BPS

2.2

68.02

Associated Gene:

Gene:

SH3BP2

Ensembl Gene ID:

ENSAPLG00000005759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027522

26079114 - 26114662

35549

ENSAPLT00000006006

26098201 - 26114662

16462