Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_26206162_26207177_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26206162 - 26207177

Intron Length:

1016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATCAC

5'SS Class:

major

3'SS Sequence:

CTCTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TATTTCCCATCC

Flanking Amino Acid:

SILDYYSRTQDGLYLSLQHG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

65.8

40.2

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

84.9

0.78

0.8

79.6

32.4

Minor 5ss

32.8

-2

3.2

43.8

43.9

Minor BPS

46.9

-0.2

2.1

64.47

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029573

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043078

26205973 - 26209376

3404