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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26247549_26248203_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
26247549 - 26248203

Intron Length:
655

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTAGGTATC

5'SS Class:
major

3'SS Sequence:
GTCTGTTTCTCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTAAAAT

U12 Branch Point Sequence:
TTAAAATAGAGA

Flanking Amino Acid:
SQCESIRCSIERDYNQLCDK

Intron Amino Acid Position:
47

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.3
0.69
1
76.5
39.2

Major BPS
70.6
0.51
1.1
75.9
34.4

Major PPT
78.6
0.64
0.9
76.1
37.8

Minor 5ss
39.4
-1.2
3.1
54.6
42.8

Minor BPS
38
-0.9
2.1
50.08
40.6

Associated Gene:

Gene:
GRK4

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26237329 - 26267833
30505

26237329 - 26269458
32130