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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26283063_26287113_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26283063 - 26287113

Intron Length:

4051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTCATGATAT

Flanking Amino Acid:

ADECLNKVIKVLMDSNLPRL

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

87.4

26.6

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

86.7

0.83

0.8

81.8

34.6

Minor 5ss

41.1

-1

3.2

58.9

39.4

Minor BPS

48.4

-0

73.33

42.5

Associated Gene:

Gene:

HTT

Ensembl Gene ID:

ENSAPLG00000007777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008199

26276572 - 26355318

78747