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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26288866_26289094_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

26288866 - 26289094

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTTTA

5'SS Class:

weak_major

3'SS Sequence:

ATCTTGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

ATAACATTATCT

Flanking Amino Acid:

GNFANDNEIKVLLKAFIANL

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

76.7

34.9

Major BPS

73.8

0.59

0.9

26.8

Major PPT

79.3

0.66

0.8

77.3

36.4

Minor 5ss

68.9

0.64

1.8

75.8

40.1

Minor BPS

53.3

0.18

1.9

73.89

42.1

Associated Gene:

Gene:

HTT

Ensembl Gene ID:

ENSAPLG00000007777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008199

26276572 - 26355318

78747