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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26291357_26295282_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26291357 - 26295282

Intron Length:

3926

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

TCACACTTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

CTTTTCTTACAT

Flanking Amino Acid:

NRSGSIVELIGKILLGEEEG

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

30.2

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

66.9

0.38

58.8

41.3

Minor 5ss

45.5

-0.5

2.9

64.1

47.4

Minor BPS

63.1

0.49

1.8

80.39

41.7

Associated Gene:

Gene:

HTT

Ensembl Gene ID:

ENSAPLG00000007777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008199

26276572 - 26355318

78747