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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26296154_26297960_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26296154 - 26297960

Intron Length:

1807

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

TTGTACTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

GTTATTTTAAGT

Flanking Amino Acid:

AVTPSDSSEIVLEGAEGQYS

Intron Amino Acid Position:

520

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

70.9

39.3

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

75.9

0.58

0.9

70.6

35.8

Minor 5ss

38.9

-1.3

3.4

55.1

43.4

Minor BPS

0.42

1.7

76.69

40.1

Associated Gene:

Gene:

HTT

Ensembl Gene ID:

ENSAPLG00000007777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008199

26276572 - 26355318

78747