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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26302792_26303598_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26302792 - 26303598

Intron Length:

807

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTATCATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTATCCTAAACT

Flanking Amino Acid:

LLETLAEVDFRLVNFLEGKT

Intron Amino Acid Position:

817

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

85.6

31.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.5

0.78

0.7

81.3

29.2

Minor 5ss

39.1

-1.2

3.4

45.5

Minor BPS

0.8

1.6

85.91

39.8

Associated Gene:

Gene:

HTT

Ensembl Gene ID:

ENSAPLG00000007777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008199

26276572 - 26355318

78747