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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26311417_26312568_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26311417 - 26312568

Intron Length:

1152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTAATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTCTTTTAATT

Flanking Amino Acid:

DDVAPGPAVKAALPSLTNPP

Intron Amino Acid Position:

1106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.9

0.99

0.8

92.6

23.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.65

0.8

71.2

38.6

Minor 5ss

47.8

-0.2

2.5

68.3

42.6

Minor BPS

70.3

0.72

1.2

80.3

36.2

Associated Gene:

Gene:

HTT

Ensembl Gene ID:

ENSAPLG00000007777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008199

26276572 - 26355318

78747